Package: tidyDenovix 2.1.0

tidyDenovix: Cleans Spectrophotometry Data Obtained from the Denovix DS-11 Instrument

Cleans spectrophotometry data obtained from the Denovix instrument. The package also provides an option to normalize the data in order to compare the quality of the samples obtained.

Authors:Tingwei Adeck [aut, cre]

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tidyDenovix.pdf |tidyDenovix.html✨
tidyDenovix/json (API)
NEWS

# Install 'tidyDenovix' in R:

install.packages('tidyDenovix', repos = c('https://alphaprime7.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/alphaprime7/tidydenovix/issues

Datasets:

rna1 - Rna1.
rna2 - Rna2.
rna3 - Rna3.
spec - Spec.

On CRAN:

data-analysis dna research rna spectrophotometry

13 exports 1 stars 1.26 score 33 dependencies 2 scripts 229 downloads

Last updated 2 months agofrom:c8c8275f1a. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 12 2024
R-4.5-win	OK	Sep 12 2024
R-4.5-linux	OK	Sep 12 2024
R-4.4-win	OK	Sep 12 2024
R-4.4-mac	OK	Sep 12 2024
R-4.3-win	OK	Sep 12 2024
R-4.3-mac	OK	Sep 12 2024

Exports:extract_col_names extract_sample_names extract_wavelength file_ext lambda_check lambda_check_source make_wavelength min_max_norm qc_attributes read_denovix read_denovix_data REnum tidyDenovix

Dependencies:cellranger cli cpp11 crayon data.table dplyr fansi generics glue hms janitor lifecycle lubridate magrittr pillar pkgconfig prettyunits progress purrr R6 readxl rematch rlang snakecase stringi stringr tibble tidyr tidyselect timechange utf8 vctrs withr

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Title: Extract key colnames from the Denovix data frame	extract_col_names
Title: Extract sample names from the Denovix data frame	extract_sample_names
Title: Extract wavelength	extract_wavelength
Title: File Extension Finder	file_ext
Title: Wavelength quality control	lambda_check
Title: Wavelength quality control	lambda_check_source
Title: Make wavelength	make_wavelength
Title: Min-Max normalization of attributes that require normalization	min_max_norm
Title: Quality Control data frame	qc_attributes
Title: Read Denovix files	read_denovix
Title: Read Denovix files	read_denovix_data
Title: Enum function	REnum
rna1.	rna1
rna2.	rna2
rna3.	rna3
spec.	spec
Title: Clean data from the Denovix DS-11 instrument	tidyDenovix